Background Fungal infection predominantly damages agricultural practices, and conventional chemical fungicides and insecticides are applied to control it, which extensively harms human health and the environment. Some bacterial species can control fungus by lysing its outer chitin layer.Objectives The present research aimed to isolate microorganisms capable of producing chitinase, thus acting as a highly effective biocontrol agent in combating fungal phytopathogens.Methods Two chitinase-producing bacterial strains were successfully isolated and screened from soil samples from a fish market environment. The process involved the aseptic collection of soil samples, followed by serial dilution to facilitate microorganism isolation. The bacterium exhibited optimal extracellular chitinase enzyme production following a 72-h incubation period at a temperature of 30 degrees C in a chitinase detection medium containing 0.5% chitin. Validation of chitinase production was confirmed through a clear zone assay, thus verifying its chitinase-producing capacity.Results Among the various isolated strains, isolates S3C1 and S3C3 demonstrated the highest chitinase activity, leading to their selection for further investigation. Comprehensive morphological and biochemical tests were conducted on these two isolates to assess their characteristics and capabilities. These tests established that both isolates were gram-negative, rod-shaped bacteria. Through genetic sequencing of the 16S rRNA gene, both organisms were identified as Klebsiella variicola exhibiting a remarkable similarity of 99% with S3C1 and S3C3 respectively. The bacteria exhibited maximum chitinase synthesis at optimal circumstances, which were determined to be a temperature of 30 degrees C and a pH of 7, after a 48-h incubation period. The bacteria exhibited robust antifungal activity during bioassays, demonstrating their capability to suppress the growth of fungal pathogens (specifically, Fusarium oxysporum) in vitro.Conclusion This research suggests a promising alternative to synthetic fungicides in agricultural practices, fostering a sustainable approach to disease management.

The most damaging disease of oil palm is Fusarium wilt caused by a soilborne fungal pathogen, Fusarium oxysporum f. sp. elaeidis (Foe). The disease is endemic to Africa and affects oil palm production there. Limited Fusarium wilt outbreaks have occurred in South America, but the disease has not yet been reported in South-East Asia. An earlier review of Foe in 2006 provided updates on symptoms, spread and the difficulty in managing the disease. This paper updates our knowledge of oil palm, socio-economic and environmental impacts of cultivation, Fusarium wilt disease epidemiology, Foe detection techniques, disease management strategies and biosecurity perspectives. Breeding for tolerant plant materials has significantly advanced in Africa, but financial constraints in several countries have limited the production of tolerant oil palm seed materials. Other emerging technologies for Foe control are also presented here, acknowledging the specific challenges to help inform the oil palm industry. We highlight the need to strengthen biosecurity plans in disease-free regions. In these countries/regions that are currently free from the pathogen but cultivating susceptible plant materials, biosecurity protocols are essential to reduce threat of disease introduction and spread. Climatic change is another challenge for oil palm-producing countries, both those currently free from the disease and those where Foe is endemic, and should be taken into consideration when planning and implementing biosecurity measures.

Fusarium wilt, caused by Fusarium oxysporum f. sp. lycopersici, threatens global tomato production, with losses reaching 80%. Although chemical fungicides are effective, their prolonged use risks resistant strains, reduces soil biodiversity, and causes environmental damage, highlighting the urgent need for ecofriendly alternatives. This study investigated the viability of Salvia officinalis (sage) methanolic extract as a biocontrol agent against Fusarium wilt (FW), employing a comprehensive approach that incorporates in vitro, in vivo, and molecular docking techniques. Four distinct isolates of F. oxysporum were identified through molecular techniques, and their virulence was assessed by examining the presence of tomatinase genes. The antifungal properties of S. officinalis extract were found to be compelling, with a total phenolic content of 64.15 mg GAE/g and a remarkable antioxidant activity of 97.04%. In laboratory tests, S. officinalis exhibited potent antifungal activity, inhibiting mycelial growth by between 52.00% and 88.67% at a concentration of 20 mg/ml. Additionally, in vivo experiments demonstrated a significant reduction in disease severity in treated tomato plants. Molecular docking analyses revealed strong binding affinities between key phytochemicals in the extract and target receptors such as tomatinase, highlighting the potential of the extract as a sustainable and effective alternative to chemical fungicides for managing FW in tomato crops.

Soil-borne plant pathogens are the most damaging pathogens responsible for severe crop damage. A conventional chemotherapy approach to these pathogens has numerous environmental issues, while biological control agents (BCAs) are less promising under field conditions. There is an immediate need to develop an integrated strategy for utilizing nanoparticles and biocontrol to manage soil-borne pathogens, such as Fusarium wilt, effectively. Simulation of BCA metabolites to nanoparticle biocontrol metabolites is considered the most effective biocontrol approach. Combining Fe2O3 nanoparticles and Trichoderma in nursery and field conditions manages pathogens and increases plant growth characteristics. The present study evaluated the commercial biocontrol strains and the use of NPFe in combination with Trichoderma harzianum to enhance the biocontrol potential of T. harzianum against soil-borne pathogens. The effectiveness of (NPFe + T. harzianum) was evaluated under in vitro conditions where combination was found most effective upto (87.63%) mycelial growth inhibition of pathogen and under field conditions lowest pooled Fusarium wilt incidence (19.54%) was recorded. Nanocomposites are beneficial for agricultural sustainability and environmental safety by upregulating the expression of genes linked to these processes, Fe NPs can activate plant defense mechanisms and increase plant resistance to pathogenic invasions. Additionally, as iron is a necessary component for plant growth and development, Fe NPs promote better nutrient uptake.

Fusarium wilt disease severely constrains the global banana industry. The highly destructive disease is caused by Fusarium oxysporum f. sp. cubense, especially its virulent tropical race 4 (Foc TR4). Selenium (Se), a non-essential mineral nutrient in higher plants, is known to enhance plant resistance against several fungal pathogens. The experiments we conducted showed that selenium (>= 10 mg/L) dramatically inhibited the growth of Foc TR4 mycelia and promoted plant growth. The further study we performed recorded a substantial reduction in the disease index (DI) of banana plants suffering from Foc TR4 when treated with selenium. The selenium treatments (20 similar to 160 mg/L) demonstrated significant control levels, with recorded symptom reductions ranging from 42.4% to 65.7% in both greenhouse and field trials. The DI was significantly negatively correlated with the total selenium content (TSe) in roots. Furthermore, selenium treatments enhanced the antioxidant enzyme activities of peroxidase (POD), polyphenol oxidase (PPO), and glutathione peroxidase (GSH-Px) in banana. After two applications of selenium (100 and 200 mg/plant) in the field, the TSe in banana pulps increased 23.7 to 25.9-fold and achieved the Se enrichment standard for food. The results demonstrate that selenium applications can safely augment root TSe levels, both reducing Fusarium wilt disease incidence and producing Se-enriched banana fruits. For the first time, this study has revealed that selenium can significantly reduce the damage caused by soil-borne pathogens in banana by increasing the activities of antioxidant enzymes and inhibiting fungal growth.

Vascular wilt is an important tomato disease that affects culture yields worldwide, with Fusarium oxysporum (F.o) being the causal agent of this infection. Several management strategies have lost effectiveness due to the ability of this pathogen to persist in soil and its progress in vascular tissues. However, nowadays, research has focused on understanding the plant defense mechanisms to cope with plant diseases. One recent and promising approach is the use of extracellular DNA (eDNA) based on the ability of plants to detect their self-eDNA as damage-associated molecular patterns (DAMPs) and pathogens' (non-self) eDNA as pathogen-associated molecular patterns (PAMPs). The aim of this work was to evaluate the effect of the eDNA of F.o (as a DAMP for the fungus and a PAMP for tomato plants) applied on soil, and of tomato's eDNA (as a DAMP of tomato plants) sprayed onto tomato plants, to cope with the disease. Our results suggested that applications of the eDNA of F.o (500 ng/mu L) as a DAMP for this pathogen in soil offered an alternative for the management of the disease, displaying significantly lower disease severity levels in tomato, increasing the content of some phenylpropanoids, and positively regulating the expression of some defense genes. Thus, the eDNA of F.o applied in soil was shown to be an interesting strategy to be further evaluated as a new element within the integrated management of vascular wilt in tomato.

Researchers often consider microorganisms from Stenotrophomonas sp. to be beneficial for plants. In this study, the biocidal effects and action mechanisms of volatile organic compounds (VOCs) produced by Stenotrophomonas sp. NAU1697 were investigated. The mycelial growth and spore germination of Fusarium oxysporum f. sp. cucumerinum (FOC), which is a pathogen responsible for cucumber wilt disease, were significantly inhibited by VOCs emitted from NAU1697. Among the VOCs, 33 were identified, 11 of which were investigated for their antifungal properties. Among the tested compounds, 2-ethylhexanol exhibited the highest antifungal activity toward FOC, with a minimum inhibitory volume (MIV) of 3.0 mu L/plate (equal to 35.7 mg/L). Damage to the hyphal cell wall and cell membrane integrity caused a decrease in the ergosterol content and a burst of reactive oxygen species (ROS) after 2-ethylhexanol treatment. DNA damage, which is indicative of apoptosis-like cell death, was monitored in 2-ethylhexanol-treated FOC cells by using micro-FTIR analysis. Furthermore, the activities of mitochondrial dehydrogenases and mitochondrial respiratory chain complex III in 2-ethylhexanol-treated FOC cells were significantly decreased. The transcription levels of genes associated with redox reactions and the cell wall integrity (CWI) pathway were significantly upregulated, thus indicating that stress was caused by 2-ethylhexanol. The findings of this research provide a new avenue for the sustainable management of soil-borne plant fungal diseases.

Fusarium wilt is a worldwide soil-borne fungal disease caused by Fusarium oxysporum that causes serious damage to agricultural products. Therefore, preventing and treating fusarium wilt is of great significance. In this study, we purified ten single lipopeptide fengycin components from Bacillus subtilis FAJT-4 and found that C-17 fengycin B inhibited the growth of F. oxysporum FJAT-31362. We observed early apoptosis hallmarks, including reactive oxygen species accumulation, mitochondrial dysfunction, and phosphatidylserine externalization in C-17 fengycin B-treated F. oxysporum cells. Further data showed that C-17 fengycin B induces cell apoptosis in a metacaspase-dependent manner. Importantly, we found that the expression of autophagy-related genes in the TOR signaling pathway was significantly upregulated; simultaneously, the accumulation of acidic autophagy vacuoles in F. oxysporum cell indicated that the autophagy pathway was activated during apoptosis induced by C-17 fengycin B. Therefore, this study provides new insights into the antifungal mechanism of fengycin.

Wheat (Triticum aestivum) employs various strategies to defend against Fusarium oxysporum, a soilborne vascular fungal pathogen that disrupts structural integrity and metabolism. The purpose of this research was to ascertain the alterations of anatomical and biochemical responses in wild-type (WT) and DPA-treated wheat (T. aestivum) seedlings exposed to F. oxysporum. The WT and DPA-treated seedlings showed disorganization of parenchyma cells, sclerenchyma cells, vascular bundles (VBs), and lower numbers of xylem (Xy) and phloem (Ph) cells, and reduced thickness of the cuticle layer (C) at the epidermal layer of shoots. The content of chlorophyll (Chl), carbohydrate, and nucleic acid was reduced in WT and DPA-treated seedlings during infection. Enhanced defense responses through peroxidase (POD), and polyphenol oxidase (PPO) was observed to be high in WT as compared to DPAtreated seedlings under stress condition. In addition, the content of salicylic acid (SA) and phenolics was increased in WT than DPA under stress condition. However, the DPA-treated seedlings showed enhanced growth of fungal mycelia compared to WT during stress condition. Hence, the anatomical and biochemical aspects of DPA-treated seedlings decreased as compared to WT when exposed to F. oxysporum.