Abandoned farmlands are increasing due to socio-economic changes and land marginalization, and they require sustainable land management practices. Biocrusts are a common cover on the topsoil of abandoned farmlands and play an important role in improving soil stability and erosion resistance. The critical functions of biocrusts are known to mostly rely on their biofilaments and extracellular polymeric substances (EPS), but how these components act at microscopic scale is still unknown, while rheological methods are able to provide new insights into biocrust microstructural stability at particle scale. Here, bare soil and two representative types of biocrusts (cyanobacterial and moss crusts) developed on sandy (Ustipsamments) and sandy loam (Haplustepts) soils in abandoned farmlands in the northern Chinese Loess Plateau were collected at a sampling depth of 2 cm. Changes in the rheological properties of the biocrusts were analyzed with respect to their biofilament network and EPS contents to provide possible explanations. The rheological results showed that compared with bare soil, storage and loss moduli were decreased by the biocrusts on sandy soil, but they were increased by the biocrusts on sandy loam soil. Other rheological parameters tau max, gamma L, gamma YP, and Iz of biocrusts on both soils were significantly higher than those of bare soil, showing higher viscoelasticity. And the moss crusts had about 10 times higher rheological property values than the cyanobacterial crusts. Analysis from SEM images showed that the moss crusts had higher biofilament network parameters than the cyanobacterial crusts, including nodes, crosslink density, branches, branching ratio and mesh index, and biofilament density, indicating that the biofilament network structure in the moss crusts was more compact and complex in contrast to the cyanobacterial crusts. Additionally, EPS content of the moss crusts was higher than that of the cyanobacterial crusts on both soils. Overall, the crosslink density, biofilament density, and EPS content of the biocrusts were significantly and positively correlated with their gamma YP and Iz. The interaction between crosslink density and biofilament density contributed 73.2 % of gamma YP, and that between crosslink density and EPS content contributed 84.0 % of Iz. Our findings highlight the biocrusts-induced changes of abandoned farmland soil rheological properties in drylands, and the importance of biocrust biofilament network and EPS in maintaining abandoned farmland soil microstructural stability to resist soil water/wind erosion and degradation, providing a new perspective for sustainable management of abandoned farmlands.

Soil organisms are key to plant growth and ecosystem functions. Earthworms (EWs) enhance soil and indirectly affect plant growth, while their cutaneous excreta (CEx) contain bioactive compounds capable of eliciting plant responses. However, their role in plant immunity is still not well understood. We hypothesized that EWs and their CEx enhance plant defense against foliar pathogens by activating induced resistance. To test this, we evaluated the effect of Eisenia fetida and their CEx on Solanum lycopersicum (tomato), focusing on growth, physiology, and defense response against Botrytis cinerea. Plants were exposed to EWs, CEx, or water (control), followed by B. cinerea infection after two weeks. Gene expression of defense markers was assessed at 24 and 48 h post-inoculation (hpi), while physiological parameters and disease severity were evaluated at 72 hpi. EWs increased shoot biomass compared to CEx, while both treatments reduced root dry weight, suggesting a possible shift in resource allocation. CEx significantly reduced B. cinerea-induced leaf damage and showed a trend for flavonoid accumulation, a known marker of induced resistance. Both treatments, EWs and CEx, activated the jasmonic acid (JA) signaling pathway, with CEx specifically upregulating genes involved in fungal pathogen defense, sustaining their expression over time. The present study offers, for the first time, clear evidence that EW derived CEx can induce resistance by stimulating plant defense responses. Further biochemical, transcriptomic, and metabolomic analyses are needed to confirm indirect results, along with field validation. Nonetheless, the findings underscore the crucial role of soil biodiversity in enhancing crop resilience.

Effective erosion mitigation in the Pisha sandstone region is crucial for soil and water conservation in the Yellow River Basin, yet existing vegetation measures are inadequate in water-limited environments. This study examines the application of drought-tolerant biological soil crusts (biocrusts) for erosion control on sandstone slopes and evaluates their erosion-reducing effects under varying coverage and slope conditions through controlled artificial rainfall experiments. Key findings include: (1) biocrusts coverage demonstrated a linear relationship with initial runoff generation time and an exponential relationship with stable runoff generation time. On average, biocrusts delayed initial runoff generation by 396.32 % and extended stable runoff generation time by 153.93 %, thereby increasing the threshold for both initial and stable runoff generation on Pisha-sandstone surfaces. (2) biocrusts reduced runoff volume by an average of 23.89 %, enhanced infiltration volume by 69.19 %, decreased sediment yield by 64.24 %, and lowered the soil erosion modulus by 68.98 %. These results indicated significant promotion of water infiltration and reduction of water erosion. Both effects were positively influenced by coverage and negatively impacted by slope gradient. A critical slope angle of 15 degrees and a critical coverage of 60 % were identified. When the slope was gentle (S 15 degrees), the negative impact of slope predominated, diminishing the positive effect of biocrusts. Additionally, when coverage reached or exceeded 60 %, further increaseing in coverage accelerated the enhancement of infiltration and erosion reduction. Below this threshold, the rate of improvement gradually diminished with increasing coverage. (3) The structural equation model further elucidated that biocrusts mitigate erosion by enhancing the coverage, thereby reducing runoff velocity and modifying the runoff regime. This mechanism effectively dissipates runoff energy, leading to a decreased soil detachment rate and alleviation of soil erosion. Additionally, the relationship between runoff energy and soil detachment rate follows a power function curve, providing an effective method for predicting erosion in Pisha sandstone area. Consequently, biological soil crust technology shows considerable potential for preventing water erosion damage on Pisha sandstone slopes across various gradients.

Arbuscular mycorrhizal (AM) fungi are important plant symbionts that provide plants with nutrients and water as well as support plant defences against pests and disease. Consequently, they present a promising alternative to using environmentally damaging and costly fertilisers and pesticides in agricultural systems. However, our limited understanding of how agricultural practices impact AM fungal diversity and functions is a key impediment to using them effectively in agriculture. We assessed how organic and conventional agricultural management systems shaped AM fungal communities. We also investigated how AM fungal communities derived from these agricultural management systems affected crop biomass and development. Six soil samples from five organically and five conventionally managed agricultural sites were used to cultivate Sorghum bicolor. Plant growth, plant nutrient concentrations and AM fungal colonisation rates were analysed alongside DNA metabarcoding of community composition. We observed that soil from conventional agricultural fields resulted in a pronounced reduction in sorghum biomass (-53.6%) and a significant delay in flowering compared to plants grown without AM fungi. Sorghum biomass was also reduced with soil from the organic system, but to a lesser extent (-30%) and without a delay in flowering. Organic systems were associated with a large proportion of AM fungal taxa (50.5% of VTs) not found in conventional systems, including Diversispora (r(2) = 0.09, p < 0.001), Archaeospora (r(2) = 0.07, p < 0.001) and Glomus (r(2) = 0.25, p < 0.001) spp., but also shared a large proportion of taxa with conventional systems (42.3% of VTs). Conventional systems had relatively few unique taxa (7.2% of VTs). Our results suggest that conventional agricultural practices selected against AM fungi that were, in this context, more beneficial for host plants. In contrast, organic management practices mitigate this negative effect, likely due to the presence of specific key AM fungal taxa. However, this mitigation is only partial, as less beneficial AM fungal taxa still persist, probably due to abiotic factors associated with agricultural management and the sensitivity of AM fungi to these factors. This persistence explains why the effect is not entirely eradicated. Read the free Plain Language Summary for this article on the Journal blog.

Several perennial and annual crops in the northern coast of Peru significantly reduce their productivity due to the damage caused by root-knot nematodes (RKN, Meloidogyne spp.). Routine nematode analyses carried out on these crops detected the presence of Pasteuria penetrans (Thorne) Sayre and Starr endospores attached to second stage juveniles (J2) of RKN. Soil sampling was carried out in different valleys to determine the prevalence and the number of attached endospores of P. penentrans. We also compared whether the differences between population fluctuations of Meloidogyne incognita (Kofoid and White) Chitwood in soils infested and not by P. penetrans were linked to a potential suppressive effect. 17.8% of soil samples collected from grapevine, pepper and banana plants in the valleys of Medio Piura, Bajo Piura, Alto Piura, Chira, San Lorenzo and Olmos showed presence of P. penetrans. No endopores were found in samples from crops such as sugar cane and asparagus. An average of 30.5 endospores per nematode was estimated. The J2 populations found in grapevine cultivated soils not infested with P. penetrans were 1.7 to 2.3 times higher than in soils infested by P. penetrans. The percentages of J2 with endospores were correlated (rho = 0.35; P < 0.02) with the abundance of M. incognita populations. These results confirm the widespread occurrence of P. penetrans in the crops and valleys sampled and its biological potential as a natural suppressor of Meloidogyne spp. populations in the northern coast of Peru. Further long-term surveys are needed to confirm the impact of P. penetrans on nematode regulation and collect isolates for taxonomic, molecular and host-specificity studies.

The damage caused by soil-borne diseases in Cunninghamia lanceolata (Lamb.) Hook (Cupressaceae), commonly called the Chinese fir, has become increasingly severe in China in recent years. Due to the strong seasonal dependence of the occurrence and severity of these diseases, the ecological processes influencing changes in the composition and function of the plant microbiome during different seasons of pathogen infection have been rarely studied. This study compared the seasonal variations in soil physicochemical properties between the rhizosphere soils of healthy and diseased C. lanceolata in major production areas in China. It further explored the effects of root rot on the composition, structure, and ecological functions of rhizosphere microorganisms. The results demonstrated that seasonal variations significantly influenced the physicochemical properties and microbial composition of the rhizosphere soil in C. lanceolata affected by root rot. Microbiome analysis further confirmed that, within the same season, healthy C. lanceolata contained a greater abundance of ecologically beneficial microbial taxa in the rhizosphere soil compared to diseased trees. These microorganisms may function as bioprotectants. This study enhances our understanding of the structural and functional changes in the rhizosphere soil microbiome associated with soil-borne diseases and provides potential ecological management strategies to improve plant resistance to root rot.

The use of chemical pesticides in agriculture leads to the accumulation of harmful compounds in soil and plants that can cause diseases of humans and animals. The biological method of plant protection is a promising alternative to chemical pesticides. The purpose of this study was to analyze the antagonistic activity of the Acinetobacter sp. GET13 strain against common bacterial and fungal pathogens of plant diseases in in vitro and in planta experiments. As a result, the effect of the bacterium on the growth of phytopathogenic bacteria (Clavibacter michiganensis, Erwinia carotovora, Pectobacterium carotovorum and Pseudomonas syringae), as well as phytopathogenic fungi (Helminthosporium sativum, Piricularia oryzae.) that cause serious damage to agriculture, was studied. To confirm the results obtained in these experiments, an in planta experiment was conducted on Phaseolus vulgaris (L.) The effectiveness of Acinetobacter GET13 strain for plant protection against phytopathogens was proved based on the results of taking into account the linear function between weight and volume parameters of plants at the end of the experiment. Therefore, this strain has the potential to create a biological product.

Numerous specimens stored in natural history collections have been involuntarily preserved together with their associated microbiomes. We propose exploiting century-old soils occasionally found on the roots of herbarium plants to assess the diversity of ancient soil microbial communities originally associated with these plants. We extracted total DNA and sequenced libraries produced from rhizospheric soils and roots of four plants preserved in herbaria for more than 120 years in order to characterise the preservation and taxonomic diversity that can be recovered in such contexts. Extracted DNA displayed typical features of ancient DNA, with cytosine deamination at the ends of fragments predominantly shorter than 50 bp. When compared to extant microbiomes, herbarium microbial communities clustered with soil communities and were distinct from communities from other environments. Herbarium communities also displayed biodiversity features and assembly rules typical of soil and plant-associated ones. Soil communities were richer than root-associated ones with which they shared most taxa. Regarding community turnover, we detected collection site, soil versus root and plant species effects. Eukaryotic taxa that displayed a higher abundance in roots were mostly plant pathogens that were not identified among soil-enriched ones. Conservation of these biodiversity features and assembly rules in herbarium-associated microbial communities indicates that herbarium-extracted DNA might reflect the composition of the original plant-associated microbial communities and that preservation in herbaria seemingly did not dramatically alter these characteristics. Using this approach, it should be possible to investigate historical soils and herbarium plant roots to explore the diversity and temporal dynamics of soil microbial communities.

A typical county for traditional village conservation in China is Songyang County. It is renowned for its ancient rammed earth dwellings, which exhibit a unique microclimate and possess significant historical value. However, high precipitation and acid rain under the subtropical monsoon climate have caused severe surface erosion, including cracking and spalling. This study focuses on traditional rammed earth dwellings in Chenjiapeng Village, Songyang County, combining field surveys, experimental analysis, and microscopic characterization to systematically investigate erosion mechanisms and protection strategies. Techniques, such as drone aerial photography, X-ray diffraction (XRD), field-emission scanning electron microscopy (FE-SEM), and microbial diversity detection, were employed to elucidate the anti-erosion mechanisms of gray-green biological crusts on rammed earth surfaces. The results indicate that algal crusts enhance surface compressive strength and shear resistance through macroscopic coverage (reducing raindrop kinetic energy and moisture retention) and microscopic extracellular polysaccharide-cemented soil particles forming a three-dimensional network. However, acidic environments induce metabolic acid release from algae, dissolving cementing materials and creating a surface protection-internal damage paradox. To address this, a transparent film-biofiber-acid inhibition layer composite biofilm design is proposed, integrating a biodegradable polylactic acid (PLA) mesh, algal attachment substrates, and calcium carbonate microparticles to dynamically neutralize acidic substances, achieving synergistic ecological protection and cultural heritage authenticity. This study provides innovative solutions for the anti-erosion protection of traditional rammed earth structures, emphasizing environmental compatibility and sustainability.

Several slug species are serious pests of agriculture and are difficult to control. One popular control method is the nematode Phasmarhabditis hermaphrodita, which has been used in slug control for > 25 years. However, there are reports of it failing to reduce slug numbers and damage in the field for unknown reasons. This may be due to lack of knowledge about how P. hermaphrodita performs when applied to different soils. We therefore assessed the survival, movement and pathogenicity of P. hermaphrodita infective juveniles (IJs) when added to six different soils (compost with and without peat, clay loam, loam, sandy loam and sandy soil). The soils were either frozen or autoclaved before use to eradicate resident nematodes prior to the experiment. P. hermaphrodita survived best in autoclaved compost without peat and in experiments with frozen soils, compost with and without peat was best. Survival of P. hermaphrodita was similar in other soils. Interestingly, in peat-free compost P. hermaphrodita reproduced prolifically, which may affect the long-term success of the nematode in the field as other life stages, apart from the IJ stage, cannot infect slugs. In infection experiments we found P. hermaphrodita added to compost with peat killed slugs faster than nematodes added to a sandy clay loam or sandy soil. In movement experiments, the nematodes remained within 3 cm of the application point in each soil. In summary, soil type severely affects P. hermaphrodita survival, and the ability to kill slugs; therefore it should be assessed by farmers and gardeners before use.